Defence lawyers Wylie Clarke and Devanesh Sharma submitted that there is no case against their clients and that they should be acquitted.
Assistant Director of Public Prosecutions Laisani Tabuakuro argued that there is evidence to support all the charges.
Bainimarama is charged with one count of abuse of office.
Sayed-Khaiyum is charged with one count of abuse of office and one count of obstructing the course of justice.
Dr Sharma is charged with two counts of abuse of office and two counts of breach of trust by a person employed in the public service.